qp.protonate.get_protoss.download¶

qp.protonate.get_protoss.download(job, out, key='protein')[source]¶

Download a Protoss output file.

Polls the Protoss job URL until completion, then downloads the requested output file.

Parameters:

job (str) – URL of the Protoss job location from submit().
out (str) – Path to the output file (directory created if needed).
key (str, optional) – File type to download: 'protein' (protonated PDB), 'ligand' (ligand SDF), or 'log' (processing log). Default is 'protein'.

Raises:

KeyError – If the download fails after 5 retry attempts.