All modules for which code is available

• qp.analyze.checkup
• qp.analyze.molden
• qp.analyze.multiwfn
• qp.cli
• qp.cluster.charge_count
• qp.cluster.spheres
• qp.cluster.spheres_bad
• qp.cluster.struct_to_file
• qp.manager.charge_embedding
• qp.manager.create
• qp.manager.ff14SB_dict
• qp.manager.job_scripts
• qp.manager.submit
• qp.protonate.fix
• qp.protonate.get_protoss
• qp.protonate.ligand_prop
• qp.protonate.parse_output
• qp.structure.combine_pdbs
• qp.structure.convert_nhie_oxo
• qp.structure.missing
• qp.structure.setup